Publication year:
Medina I, Carbonell J, Pulido L, Madeira SC, Goetz S, Conesa A, Tárraga J, Pascual-Montano A, Nogales-Cadenas R, Santoyo J, García F, Marbà M, Montaner D, Dopazo J.
Babelomics: an integrative platform for the analysis of transcriptomics, proteomics and genomic data with advanced functional profiling. Nucleic Acids Res. 2010; 38:W210-W213
PubMed
Javierre BM, Fernandez AF, Richter J, Al-Shahrour F, Martin-Subero JI, Rodriguez-Ubreva J, Berdasco M, Fraga MF, O'Hanlon TP, Rider LG, Jacinto FV, Lopez-Longo FJ, Dopazo J, Forn M, Peinado MA, Carreno L, Sawalha AH, Harley JB, Siebert
Changes in the pattern of DNA methylation associate with twin discordance in systemic lupus erythematosus Genome Res. 2010; 20 (2) : 170-179, FEB 2010
PubMed
Huerta-Cepas J, Dopazo J, Gabaldon T
ETE: a python Environment for Tree Exploration BMC Bioinformatics. 2010; 11:24
PubMed
Peña A, Teeling H, Huerta-Cepas J, Santos F, Yarza P, Brito-Echeverría J, Lucio M, Schmitt-Kopplin P, Meseguer I, Schenowitz C, Dossat C, Barbe V, Dopazo J, Rosselló-Mora R, Schüler M, Glöckner FO, Amann R, Gabaldón T, Antón J.
Fine-scale evolution: genomic, phenotypic and ecological differentiation in two coexisting Salinibacter ruber strains. ISME J. 2010; 4(7):882-95
PubMed
Moreno-Manzano V, Rodriguez-Jimenez FJ, Acena-Bonilla JL, Fustero-Lardies S, Erceg S, Dopazo J, Montaner D, Stojkovic M, Sanchez-Puelles JM
FM19G11, a New Hypoxia-inducible Factor (HIF) Modulator, Affects Stem Cell Differentiation Status J Biol Chem. 2010; 285 (2) : 1333-1342, JAN 8 2010
PubMed
Minguez P, Dopazo J.
Functional genomics and networks: new approaches in the extraction of complex gene modules. Expert Rev Proteomics. 2010; 7(1):55-63
PubMed
Prado-Lopez S, Conesa A, Armiñán A, Martínez-Losa M, Escobedo-Lucea C, Gandia C, Tarazona S, Melguizo D, Blesa D, Montaner D, Sanz-González S, Sepúlveda P, Götz S, O'Connor JE, Moreno R, Dopazo J, Burks DJ, Stojkovic M.
Hypoxia promotes efficient differentiation of human embryonic stem cells to functional endothelium. Stem Cells 2010; 28(3):407-18
PubMed
Nemeth A, Conesa A, Santoyo-Lopez J, Medina I, Montaner D, Peterfia B, Solovei I, Cremer T, Dopazo J, Langst G
Initial Genomics of the Human Nucleolus PLoS Genet. 2010; 6 (3), Mar
PubMed
Montaner D, Dopazo J.
Multidimensional gene set analysis of genomic data. PLoS One 2010; 5(4):e10348.
PubMed
Nueda MJ, Carbonell J, Medina I, Dopazo J, Conesa A.
Serial Expression Analysis: a web tool for the analysis of serial gene expression data. Nucleic Acids Res. 2010; 38:W239-W245
PubMed